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It's basically a choice between extra cores versus speedier base & better all-core turboing. I'll be mostly using Folding@Home & BOINC mixed with some backup data storage. Total cores 20C/40T vs 24C/48T.
For Crunching I'd go for more cores, as both are basically clocked the same +/- 100MHz the E5-2697 V2 has more Cache too.
Base speed is only relative when it's idle they both have the same TDP.